Peer-reviewed Publications |
Aerts, A., Brown, A., & Gatti F. (2022). Intramolecular vibrational redistribution in formic acid and its deuterated forms. J Chem Phys, 157, 014306.
Résumé: The intramolecular vibrational relaxation dynamics of formic acid and its deuterated isotopologues is simulated on the full-dimensional potential energy surface of Richter and Carbonniere [J. Chem. Phys. 148, 064303 (2018)] using the Heidelberg MCTDH package. We focus on couplings with the torsion vibrational modes close to the trans-cis isomerization coordinate from the dynamics of artificially excited vibrational mode overtones. The bright C-O stretch vibrational mode is coupled to the out-of-the plane torsion mode in HCOOH, where this coupling could be exploited for laser-induced trans-to-cis isomerization. Strong isotopic effects are observed: deuteration of the hydroxyl group, i.e., in HCOOD and DCOOD, destroys the C-O stretch to torsion mode coupling whereas in DCOOH, little to no effect is observed.
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Aguillon, F., Marinica, D. C., & Borisov, A. G. (2022). Atomic-scale control of plasmon modes in graphene nanoribbons. Phys. Rev. B, 105, L081401.
Résumé: We address the possibility of atomic-scale control of the plasmon modes of graphene nanostructures. Using the time-dependent many-body approach we show that for the zigzag and armchair nanoribbons, the single carbon atom vacancy results in “on” and “off” switching of the longitudinal plasmon modes or in a change of their frequency. The effect stems from the robust underlying physical mechanism based on the strong scattering of the two-dimensional (2D) electrons on the vacancy defects in graphene lattice. Thus our findings establish a platform for optical response engineering or sensing in 2D materials.
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Albers, H., Corgier, R., Herbst, A., Rajagopalan, A., Schubert, C., Vogt, C., Woltmann, M., Lämmerzahl, C., Herrmann, S., Charron, E., Ertmer, W., Rasel, E. M., Gaaloul, N., & Schlippert, D. (2022). All-optical matter-wave lens using time-averaged potentials. Commun Phys, 5(60).
Résumé: The precision of matter-wave sensors benefits from interrogating large-particle-number atomic ensembles at high cycle rates. Quantum-degenerate gases with their low effective temperatures allow for constraining systematic errors towards highest accuracy, but their production by evaporative cooling is costly with regard to both atom number and cycle rate. In this work, we report on the creation of cold matter-waves using a crossed optical dipole trap and shaping them by means of an all-optical matter-wave lens. We demonstrate the trade off between lowering the residual kinetic energy and increasing the atom number by reducing the duration of evaporative cooling and estimate the corresponding performance gain in matter-wave sensors. Our method is implemented using time-averaged optical potentials and hence easily applicable in optical dipole trapping setups.
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Autuori A, Platzer D, Lejman M, Gallician G, Maeder L, Covolo A, Bosse L, Dalui M, Bresteau D, Hergott JF, Tcherbakoff O, Marroux HJB, Loriot V, Lepine F, Poisson L, Taieb R, Caillat J, & Salieres P. (2022). Anisotropic dynamics of two-photon ionization: An attosecond movie of photoemission. Sci Adv, 8(12), eabl7594.
Résumé: Imaging in real time the complete dynamics of a process as fundamental as photoemission has long been out of reach because of the difficulty of combining attosecond temporal resolution with fine spectral and angular resolutions. Here, we achieve full decoding of the intricate angle-dependent dynamics of a photoemission process in helium, spectrally and anisotropically structured by two-photon transitions through intermediate bound states. Using spectrally and angularly resolved attosecond electron interferometry, we characterize the complex-valued transition probability amplitude toward the photoelectron quantum state. This allows reconstructing in space, time, and energy the complete formation of the photoionized wave packet.
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Babaze, A., Ogando, E., Stamatopoulou, P. E., Tserkezis, C., Mortensen, N. A., Aizpurua, J., Borisov, A. G., & Esteban, R. (2022). Quantum surface effects in the electromagnetic coupling between a quantum emitter and a plasmonic nanoantenna: time-dependent density functional theory vs. semiclassical Feibelman approach. Opt. Express, 30(12), 21159–21183.
Résumé: We use time-dependent density functional theory (TDDFT) within the jellium model to study the impact of quantum-mechanical effects on the self-interaction Green’s function that governs the electromagnetic interaction between quantum emitters and plasmonic metallic nanoantennas. A semiclassical model based on the Feibelman parameters, which incorporates quantum surface-response corrections into an otherwise classical description, confirms surface-enabled Landau damping and the spill out of the induced charges as the dominant quantum mechanisms strongly affecting the nanoantenna–emitter interaction. These quantum effects produce a redshift and broadening of plasmonic resonances not present in classical theories that consider a local dielectric response of the metals. We show that the Feibelman approach correctly reproduces the nonlocal surface response obtained by full quantum TDDFT calculations for most nanoantenna–emitter configurations. However, when the emitter is located in very close proximity to the nanoantenna surface, we show that the standard Feibelman approach fails, requiring an implementation that explicitly accounts for the nonlocality of the surface response in the direction parallel to the surface. Our study thus provides a fundamental description of the electromagnetic coupling between plasmonic nanoantennas and quantum emitters at the nanoscale.
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Barosch, J., Nittler L.R., Wang, J., Alexander, C. O. 'D., De Gregorio, B. T., Engrand, C., Kebukawa, Y., Nagashima, K., Stroud, R. M., & Yabuta, H., et al. (2022). Presolar Stardust in Asteroid Ryugu. ApJL, 935, L3.
Résumé: We have conducted a NanoSIMS-based search for presolar material in samples recently returned from C-type asteroid Ryugu as part of JAXA's Hayabusa2 mission. We report the detection of all major presolar grain types with O- and C-anomalous isotopic compositions typically identified in carbonaceous chondrite meteorites: 1 silicate, 1 oxide, 1 O-anomalous supernova grain of ambiguous phase, 38 SiC, and 16 carbonaceous grains. At least two of the carbonaceous grains are presolar graphites, whereas several grains with moderate C isotopic anomalies are probably organics. The presolar silicate was located in a clast with a less altered lithology than the typical extensively aqueously altered Ryugu matrix. The matrix-normalized presolar grain abundances in Ryugu are ${4.8}{-2.6}^{+4.7}$ ppm for O-anomalous grains, ${25}{-5}^{+6}$ ppm for SiC grains, and ${11}{-3}^{+5}$ ppm for carbonaceous grains. Ryugu is isotopically and petrologically similar to carbonaceous Ivuna-type (CI) chondrites. To compare the in situ presolar grain abundances of Ryugu with CI chondrites, we also mapped Ivuna and Orgueil samples and found a total of 15 SiC grains and 6 carbonaceous grains. No O-anomalous grains were detected. The matrix-normalized presolar grain abundances in the CI chondrites are similar to those in Ryugu: ${23}{-6}^{+7}$ ppm SiC and ${9.0}_{-3.6}^{+5.4}$ ppm carbonaceous grains. Thus, our results provide further evidence in support of the Ryugu–CI connection. They also reveal intriguing hints of small-scale heterogeneities in the Ryugu samples, such as locally distinct degrees of alteration that allowed the preservation of delicate presolar material.
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Basalgete, R., Torres-Diaz, D., Lafosse, A., Amiaud, L., Feraud, G., Jeseck, P., Philippe, L., Michaut, X., Fillion, J. - H., & Bertin, M. (2022). Indirect x-ray photodesorption of N215 and CO13 from mixed and layered ices. JOURNAL OF CHEMICAL PHYSICS, 157(8), 084308.
Résumé: X-ray photodesorption yields of N215 and CO13 are derived as a function of the incident photon energy near the N ( approximately 400 eV) and O K-edge ( approximately 500 eV) for pure N215 ice and mixed CO13:N215 ices. The photodesorption spectra from the mixed ices reveal an indirect desorption mechanism for which the desorption of N215 and CO13 is triggered by the photoabsorption of CO13 and N215, respectively. This mechanism is confirmed by the x-ray photodesorption of CO13 from a layered CO13/N215 ice irradiated at 401 eV on the N 1s --> pi* transition of N215. This latter experiment enables us to quantify the relevant depth involved in the indirect desorption process, which is found to be 30-40 monolayers in that case. This value is further related to the energy transport of Auger electrons emitted from the photoabsorbing N215 molecules that scatter toward the ice surface, inducing the desorption of CO13. The photodesorption yields corrected from the energy that can participate in the desorption process (expressed in molecules desorbed by eV deposited) do not depend on the photon energy; hence, they depend neither on the photoabsorbing molecule nor on its state after Auger decay. This demonstrates that x-ray induced electron stimulated desorption, mediated by Auger scattering, is the dominant process explaining the desorption of N215 and CO13 from the ices studied in this work.
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Bobrov, K., Kalashnyk, N., & Guillemot, L. (2022). Two-dimensional dynamic perylene ordering on Ag(110). AIP ADVANCES, 12(11), 115223.
Résumé: We present a room temperature STM study of dynamics of the quasi-liquid perylene monolayer formed on Ag(110) under thermal equilibrium. We observe that the thermodynamic balance of the molecule–molecule and molecule–substrate interactions generates a compact two-dimensional (2D) quasi-liquid state established by mobile perylene molecules dynamically distributed into three distinct motion modes. Monitoring of the quasi-liquid monolayer indicates that each motion mode is triggered by spontaneous recognition of specific locations of the substrate lattice into which transient locking occurs. Analysis of the STM topographies shows that the substrate lattice guides the whole molecule ensemble and provides each of the modes with a distinct register. In each mode, the substrate registry forces the transiently immobile molecules to alternate with the transiently mobile ones. The dynamic interminglement of the modes prevents segregation of the dynamically active and inactive molecules. The substrate provides memory to the intermingled molecules and eliminates ergodicity of the quasi-liquid state. Fourier transform of the topographies unravels the long-range spatial correlations and epitaxial character of the quasi-liquid state. Analysis of the short-range mode coupling allows us to understand the mechanism of the long-range mode coupling. The substrate force field induces the dynamical ergodic–non-ergodic phase transition giving rise to the stationary long-range ordered quasi-liquid state.
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Boulet, C., & Ma, Q. (2022). Line coupling and line mixing effects on calculated widths of symmetric-top molecules with the k-degeneracy: A theoretical study of N2-, O2-, and air-broadened lines of CH3I. Journal of Quantitative Spectroscopy and Radiative Transfer, 288, 108273.
Résumé: Calculations of the N2-, O2-, and air-broadened widths, together with their temperature dependence exponents have been made for transitions of CH3I in the ν5 and ν6 bands. The calculations are based on a semi-classical line shape formalism developed by the current authors through modifying and refining the Robert-Bonamy formalism. In recent years, we have applied this formalism for linear molecules, symmetric-top molecules with inversion symmetry, and asymmetric-top molecules. For symmetric-top molecules with the k degeneracy such as CH3I, the formalism has a new feature. In this case, one should consider each of the CH3I transitions labeled by ki or f ≠ 0 as a doublet. Then, one needs to consider the effects of the line mixing process between these two components. Comparisons of our theoretical predictions with some data available demonstrate a very reasonable agreement. Finally we propose new experiments at higher perturber pressures that would enable one to check the theoretically calculated relaxation matrices and to extend the analysis to the inter-doublet mixing effects.
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Briant M, Mestdagh JM, Gaveau MA, & Poisson L. (2022). Reaction dynamics within a cluster environment. Phys Chem Chem Phys, 24, 9807–9835.
Résumé: This perspective article reviews experimental and theoretical works where rare gas clusters and helium nanodroplets are used as a nanoreactor to investigate chemical dynamics in a solvent environment. A historical perspective is presented first followed by specific considerations on the mobility of reactants within these reaction media. The dynamical response of pure clusters and nanodroplets to photoexcitation is shortly reviewed before examining the role of the cluster (or nanodroplet) degrees of freedom in the photodynamics of the guest atoms and molecules.
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Buntine, J. T., Carrascosa, E., Bull, J. N., Jacovella, U., Cotter, M. I., Watkins, P., Liu, C., Scholz, M. S., Adamson, B. D., Marlton, S. J. P., & Bieske, E. J. (2022). An ion mobility mass spectrometer coupled with a cryogenic ion trap for recording electronic spectra of charged, isomer-selected clusters. Review of Scientific Instruments, 93, 043201.
Résumé: Infrared and electronic spectra are indispensable for understanding the structural and energetic properties of charged molecules and clusters in the gas phase. However, the presence of isomers can potentially complicate the interpretation of spectra, even if the target molecules or clusters are mass-selected beforehand. Here, we describe an instrument for spectroscopically characterizing charged molecular clusters that have been selected according to both their isomeric form and their mass-to-charge ratio. Cluster ions generated by laser ablation of a solid sample are selected according to their collision cross sections with helium buffer gas using a drift tube ion mobility spectrometer and their mass-to-charge ratio using a quadrupole mass filter. The mobility- and mass-selected target ions are introduced into a cryogenically cooled, three-dimensional quadrupole ion trap where they are thermalized through inelastic collisions with an inert buffer gas (He or He/N2 mixture). Spectra of the molecular ions are obtained by tagging them with inert atoms or molecules (Ne and N2), which are dislodged following resonant excitation of an electronic transition, or by photodissociating the cluster itself following absorption of one or more photons. An electronic spectrum is generated by monitoring the charged photofragment yield as a function of wavelength. The capacity of the instrument is illustrated with the resonance-enhanced photodissociation action spectra of carbon clusters (Cn+) and polyacetylene cations (HC2nH+) that have been selected according to the mass-to-charge ratio and collision cross section with He buffer gas and of mass-selected Au+2 and Au2Ag+ clusters.
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Buntine, J. T., Carrascosa, E., Bull, J. N., Muller, G., Jacovella, U., Glasson, C. R., Vamvounis, G., & Bieske, E. J. (2022). Photo-induced 6π-electrocyclisation and cycloreversion of isolated dithienylethene anions. Phys. Chem. Chem. Phys., 24, 16628–16636.
Résumé: The diarylethene chromophore is commonly used in light-triggered molecular switches. The chromophore undergoes reversible 6π-electrocyclisation (ring closing) and cycloreversion (ring opening) reactions upon exposure to UV and visible light, respectively, providing bidirectional photoswitching. Here, we investigate the gas-phase photoisomerisation of meta- (m) and para- (p) substituted dithienylethene carboxylate anions (DTE−) using tandem ion mobility mass spectrometry coupled with laser excitation. The ring-closed forms of p-DTE− and m-DTE− are found to undergo cycloreversion in the gas phase with maximum responses associated with bands in the visible (λmax ≈ 600 nm) and the ultraviolet (λmax ≈ 360 nm). The ring-open p-DTE− isomer undergoes 6π-electrocyclisation in the ultraviolet region at wavelengths shorter than 350 nm, whereas no evidence is found for the corresponding electrocyclisation of ring-open m-DTE−, a situation attributed to the fact that the antiparallel geometry required for electrocyclisation of m-DTE− is energetically disfavoured. This highlights the influence of the carboxylate substitution position on the photochemical properties of DTE molecules. We find no evidence for the formation in the gas phase of the undesirable cyclic byproduct, which causes fatigue of DTE photoswitches in solution.
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Chen, N. L., Gans, B., Hartweg, S., Garcia, G. A., Boyé-Péronne, S., & Loison, J. - C. (2022). Photoionization spectroscopy of the SiH free radical in the vacuum-ultraviolet range. The Journal of Chemical Physics, 157(1), 014303.
Résumé: The first measurement of the photoelectron spectrum of the silylidyne free radical, SiH, is reported between 7 and 10.5 eV. Two main photoionizing transitions involving the neutral ground state, X+ 1Σ+ ← X 2 Π and a+ 3Π ← X 2 Π, are assigned by using ab initio calculations. The corresponding adiabatic ionization energies are derived, IEad (X+ 1Σ+ ) = 7.934(5) eV and IEad (a+ 3Π) = 10.205(5) eV, in good agreement with our calculated values and the previous determination by Berkowitz et al. [J. Chem. Phys. 86, 1235 (1987)] from a photoionization mass spectrometric study. The photoion yield of SiH recorded in this work exhibits a dense autoionization landscape similar to that observed in the case of the CH free radical [Gans et al., J. Chem. Phys. 144, 204307 (2016)].
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Chitarra, O., Pirali, O., Spaniol, J. - T., Hearne, T. S., Loison, J. - C., Stanton, J. F., & Martin-Drumel, M. - A. (2022). Pure Rotational Spectroscopy of the CH2CN Radical Extended to the Sub-Millimeter Wave Spectral Region. The Journal of Physical Chemistry A, 126(41), 7502–7513.
Résumé: We present a thorough pure rotational investigation of the CH2CN radical in its ground vibrational state. Our measurements cover the millimeter and sub-millimeter wave spectral regions (79–860 GHz) using a W-band chirped-pulse instrument and a frequency multiplication chain-based spectrometer. The radical was produced in a flow cell at room temperature by H abstraction from acetonitrile using atomic fluorine. The newly recorded transitions of CH2CN (involving N″ and Ka″ up to 42 and 8, respectively) were combined with the literature data, leading to a refinement of the spectroscopic parameters of the species using a Watson S-reduced Hamiltonian. In particular, the A rotational constant and K-dependent parameters are significantly better determined than in previous studies. The present model, which reproduces all experimental transitions to their experimental accuracy, allows for confident searches for the radical in cold to warm environments of the interstellar medium.
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Coudert, L. H., Chitarra, O., Spaniol, J. - T., Loison, J. - C., Martin-Drumel, M. - A., & Pirali, O. (2022). Tunneling motion and splitting in the CH2OH radical: (Sub-)millimeter wave spectrum analysis. The Journal of Chemical Physics, 156, 244301.
Résumé: The (sub-)millimeter wave spectrum of the non-rigid CH2OH radical is investigated both experimentally and theoretically. Ab initio calculations are carried out to quantitatively characterize its potential energy surface as a function of the two large amplitude ∠H1COH and ∠H2COH dihedral angles. It is shown that the radical displays a large amplitude torsional-like motion of its CH2 group with respect to the OH group. The rotation–torsion levels computed with the help of a 4D Hamiltonian accounting for this torsional-like motion and for the overall rotation exhibit a tunneling splitting, in agreement with recent experimental investigations, and a strong rotational dependence of this tunneling splitting on the rotational quantum number Ka due to the rotation–torsion Coriolis coupling. Based on an internal axis method approach, a fitting Hamiltonian accounting for tunneling effects and for the fine and hyperfine structure is built and applied to the fitting of the new (sub)-millimeter wave transitions measured in this work along with previously available high-resolution data. 778 frequencies and wavenumbers are reproduced with a unitless standard deviation of 0.79 using 27 parameters. The N = 0 tunneling splitting, which could not be determined unambiguously in the previous high-resolution investigations, is determined based on its rotational dependence.
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Dartois, E., Chabot, M., Koch, F., Bachelet, C., Bender, M., Bourçois, J., Duprat, J., Frereux, J., Godard, M., Hervé, S., Merk, B., Pino, T., Rojas, J., Schubert, I., & Trautmann, C. (2022). Desorption of polycyclic aromatic hydrocarbons by cosmic rays. A&A, 663, A25.
Résumé: Context. The rate of sputtering and release of condensed species is an important aspect of interstellar chemistry, as is photodesorption for the most volatile species, because in the absence of such mechanisms the whole gas phase would have to condense in times often shorter than the lifetime of the considered medium, in particular for dense clouds. The recent detection of cyclic aromatic molecules by radioastronomy requires an understanding of the potential mechanisms supporting the rather high abundances observed.
Aims. We perform experiments to advance our understanding of the sputtering yield due to cosmic rays for very large carbonaceous species in the solid phase.
Methods. Thin films of perylene and coronene were deposited on a quartz cell microbalance and exposed to a 1.5 MeV N+ ion beam at the Laboratoire de Physique des 2 Infinis Irène Joliot-Curie (IJCLab, Orsay, France) and a 230 MeV 48Ca10+ ion beam at the GSI Helmholtzzentrum für Schwerionenforschung (GSI, Darmstadt, Germany). The mass loss was recorded as a function of the fluence for the N+ beam. The microbalance response was calibrated using Fourier transform infrared (FTIR) reflectance measurements of the produced films. In addition, the destruction cross-section of the same species was measured with the 48Ca10+ ion beam by in situ monitoring of the evolution of the infrared spectra of the bombarded films.
Results. We deduced the sputtering yield for perylene and coronene and their radiolysis destruction cross-sections. Combining these results with a cosmic ray astrophysical spectrum, we discuss the impact on the possible abundance that may originate from the sputtering of dust grains with these molecules as well as from polycyclic aromatic molecules when they are trapped in ice mantles.
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Dartois, E., Noble, J. A., Ysard, N., Demyk, K., & Chabot, M. (2022). Influence of grain growth on CO2 ice spectroscopic profiles. A&A, 666, A153.
Résumé: Context. Interstellar dust grain growth in dense clouds and protoplanetary disks, even when moderate, affects the observed interstellar ice profiles as soon as a significant fraction of dust grains are in the size range close to the wave vector at the considered wavelength. The continuum baseline correction made prior to analysing ice profiles influences the subsequent analysis and hence the estimated ice composition, which are typically obtained by band fitting using thin film ice mixture spectra.
Aims. We explore the effect of grain growth on the spectroscopic profiles of ice mantle constituents, focusing particularly on carbon dioxide, with the aim of understanding how it can affect interstellar ice mantle spectral analysis and interpretation.
Methods. Using the discrete dipole approximation for scattering and absorption of light, the mass absorption coefficients of several distributions of grains – composed of ellipsoidal silicate cores with water and carbon dioxide ice mantles – are calculated. A few models also include amorphous carbon in the core and pure carbon monoxide in the ice mantle. We explore the evolution of the size distribution starting in the dense core phase in order to simulate the first steps of grain growth up to three microns in size. The resulting mass absorption coefficients are injected into RADMC-3D radiative transfer models of spherical dense core and protoplanetary disk templates to retrieve the observable spectral energy distributions. Calculations are performed using the full scattering capabilities of the radiative transfer code. We then focus on the particularly relevant calculated profile of the carbon dioxide ice band at 4.27 µm.
Results. The carbon dioxide anti-symmetric stretching mode profile is a meaningful indicator of grain growth. The observed profiles towards dense cores obtained with the Infrared Space Observatory and Akari satellites already show profiles possibly indicative of moderate grain growth.
Conclusions. The observation of true protoplanetary disks at high inclination with the James Webb Space Telescope should present distorted profiles that will allow constraints to be placed on the extent of dust growth. The more evolved the dust size distribution, the more the extraction of the ice mantle composition will require both understanding and taking grain growth into account.
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Dowek, D., & Decleva, P. (2022). Trends in angle-resolved molecular photoelectron spectroscopy. Phys Chem Chem Phys, 40(24), 24614–24654.
Résumé: The field of angle-resolved molecular photoelectron spectroscopy is reviewed, with emphasis on foundations and most recent applications in different regimes of light-matter interaction. The basic formalism underlying one-photon electron angular distributions is presented, from the primary molecular frame (MF) photoemission i.e. emission from fully oriented molecules to laboratory frame (LF) observables produced from randomly oriented targets, extensions to multiphoton and strong field processes being briefly described, followed by a survey of current quantum mechanical computational approaches. The description of experimental developments is focused on the advancements in two major instrumentation fields for angle-resolved PES of molecules in the last two decades, namely charged-particle imaging spectrometers and adiabatically or impulsively laser-induced molecular alignment, together with their interplay with the remarkable characteristics achieved nowadays by the ionizing light sources and the challenging control of complex molecules in the gas phase. Aspects and applications of LF angular observables from unoriented targets are presented, with contemporary applications, especially as probes of the target electronic structure, including higher angular observables, in particular photoelectron circular dichroism (PECD) from chiral molecules, which is confirmed as a powerful chiral technique, and higher terms arising from multiphoton or non-dipole terms. Molecular frame photoelectron angular distributions (MFPADs), which stand out as the most complete observables of molecular photoionization stereodynamics in different excitation regimes, now broadly extended to characterize molecular structure and dynamics, are then discussed stemming from fully oriented molecules tackled by electron-ion momentum coincidence techniques, or from laser aligned samples. Finally, novel developments and challenging perspectives, notably the implementation of PAD in time-resolved schemes at ultrashort time scales, high energy, and high intensity regimes are drawn.
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Drozdovskaya, M. N., Coudert, L. H., Margulès, L., Coutens, A., Jørgensen, J. K., & Manigand, S. (2022). Successive deuteration in low-mass star-forming regions: The case of D2-methanol (CHD2OH) in IRAS 16293-2422. A&A, 659, A69.
Résumé: Context. Di-deuterated molecules are observed in the earliest stages of star formation at abundances of a few percent relative to their nondeuterated isotopologs, which is unexpected considering the scarcity of deuterium in the interstellar medium. With sensitive observations leading to the detection of a steadily increasing number of di-deuterated species, it is becoming possible to explore successive deuteration chains.
Aims. The accurate quantification of the column density of di-deuterated methanol is a key piece of the puzzle that is missing in the otherwise thoroughly constrained family of D-bearing methanol in the deeply embedded low-mass protostellar system and astrochemical template source IRAS 16293-2422. A spectroscopic dataset for astrophysical purposes was built for CHD2OH and made publicly available to facilitate the accurate characterization of this species in astrochemical surveys.
Methods. The newly computed line list and partition function were used to search for CHD2OH toward IRAS 16293-2422 A and B in data from the Atacama Large Millimeter/submillimeter Array (ALMA) Protostellar Interferometric Line Survey (PILS). Only nonblended, optically thin lines of CHD2OH were used for the synthetic spectral fitting.
Results. The constructed spectroscopic database contains line frequencies and strengths for 7417 transitions in the 0–500 GHz frequency range. ALMA-PILS observations in the 329–363 GHz range were used to identify 105 unique, nonblended, optically thin line frequencies of CHD2OH for synthetic spectral fitting. The derived excitation temperatures and column densities yield high D/H ratios of CHD2OH in IRAS 16293-2422 A and B of 7.5 ± 1.1% and 7.7 ± 1.2%, respectively.
Conclusions. Deuteration in IRAS 16293-2422 is not higher than in other low-mass star-forming regions (L483, SVS13-A, NGC 1333-IRAS2A, -IRAS4A, and -IRAS4B). Di-deuterated molecules consistently have higher D/H ratios than their mono-deuterated counterparts in all low-mass protostars, which may be a natural consequence of H–D substitution reactions as seen in laboratory experiments. The Solar System’s natal cloud, as traced by comet 67P/Churyumov–Gerasimenko, may have had a lower initial abundance of D, been warmer than the cloud of IRAS 16293-2422, or been partially reprocessed. In combination with accurate spectroscopy, a careful spectral analysis, and the consideration of the underlying assumptions, successive deuteration is a robust window on the physicochemical provenance of star-forming systems.
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Dupont, J., Guillot, R., Lepère, V., & Zehnacker, A. (2022). Jet-cooled laser spectroscopy and solid-state vibrational circular dichroism of the cyclo-(Tyr-Phe) diketopiperazine dipeptide. Journal of Molecular Structure, 24, 19783–19791.
Résumé: The structures of the diastereomer diketopiperazine dipeptides cyclo(LTyr-LPhe) and cyclo-(DTyr-LPhe) are studied in the gas phase using resonance-enhanced two-photon ionization, IR/UV double resonance spectroscopy and quantum chemical calculation. Both diastereomers exhibit two conformations, with the tyrosine ring folded over the DKP ring and the phenylalanine ring extended outwards, or vice versa. The two diastereomers differ only slightly by the nature of weak CH···π and NH···π interactions. The crystal structure of cyclo(LTyr-LPhe) is determined by X-ray crystallography and is composed of monomers with folded tyrosine ring. The vibrational circular dichroism spectrum is interpreted by the existence of dimers in the solid state. Quantum chemical calculation shed light on the structural modifications between the gas phase and the solid state.
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Fakhardji, W., Boulet, C., Tran, H., & Hartmann, J. - M. (2022). Direct calculations of the CH4+CO2 far infrared collision-induced absorption. Journal of Quantitative Spectroscopy and Radiative Transfer, 283, 108148.
Résumé: We present computations, solely using input data from the literature and thus free of any adjusted parameter, of the far infrared collision-induced absorption (CIA) by interacting CH4 and CO2 molecules. They are based on classical molecular dynamics simulations (CMDS) of the rotational and translational motions of the molecules made using an accurate ab initio CH4-CO2 anisotropic intermolecular potential, and on a long-range expansion of the interaction-induced dipole. Various desymmetrization procedures, which all ensure detailed balance of the spectral density function are a posteriori applied to the CMDS results. The comparison with the available measurements, which have been collected at room temperature, show that a good agreement can be obtained without introducing any ad hoc short-range dipole components, and it enables to point out the limits of some of the desymmetrization procedures. Tests are also made of the so-called “isotropic approximation”, which point out its strong limits, since it leads to large underestimations of the CIA, and question previous computations made using an isotropic potential and long-range expansion of the induced dipole complemented by ad hoc contributions at short distances. Finally, the temperature dependence of the CIA is predicted for applications to planetary atmospheres.
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Fischer, T. L., Bödecker, M., Zehnacker-Rentien, A., Mata, R. A., & Suhm, M. A. (2022). Setting up the HyDRA blind challenge for the microhydration of organic molecules. PCCP, 24, 11442–11454.
Résumé: The procedure leading to the first HyDRA blind challenge for the prediction of water donor stretching vibrations in monohydrates of organic molecules is described. A training set of 10 monohydrates with experimentally known and published water donor vibrations is presented and a test set of 10 monohydrates with unknown or unpublished water donor vibrational wavenumbers is described together with relevant background literature. The rules for data submissions from computational chemistry groups are outlined and the planned publication procedure after the end of the blind challenge is discussed.
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Gaaloul, N., Meister, M., Corgier, R., Pichery, A., Boegel, P., Herr, W., Ahlers, H., Charron, E., Williams, J. R., Thompson, R. J., Schleich, W. P., Rasel, E. M., & Bigelow, N. P. (2022). A space-based quantum gas laboratory at picokelvin energy scales. Nat Commun, (13), 7989.
Résumé: Ultracold quantum gases are ideal sources for high-precision space-borne sensing as proposed for Earth observation, relativistic geodesy and tests of fundamental physical laws as well as for studying new phenomena in many-body physics during extended free fall. Here we report on experiments with the Cold Atom Lab aboard the International Space Station, where we have achieved exquisite control over the quantum state of single (87)Rb Bose-Einstein condensates paving the way for future high-precision measurements. In particular, we have applied fast transport protocols to shuttle the atomic cloud over a millimeter distance with sub-micrometer accuracy and subsequently drastically reduced the total expansion energy to below 100 pK with matter-wave lensing techniques.
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Genossar, N., Changala, P. B., Gans, B., Loison, J. - C., Hartweg, S., Martin-Drumel, M. - A., Garcia, G. A., Stanton, J. F., Ruscic, B., & Baraban, J. H. (2022). Ring-Opening Dynamics of the Cyclopropyl Radical and Cation: the Transition State Nature of the Cyclopropyl Cation. Journal of the American Chemical Society, 144(40), 18518–18525.
Résumé: We provide compelling experimental and theoretical evidence for the transition state nature of the cyclopropyl cation. Synchrotron photoionization spectroscopy employing coincidence techniques together with a novel simulation based on high-accuracy ab initio calculations reveal that the cation is unstable via its allowed disrotatory ring-opening path. The ring strains of the cation and the radical are similar, but both ring opening paths for the radical are forbidden when the full electronic symmetries are considered. These findings are discussed in light of the early predictions by Longuet-Higgins alongside Woodward and Hoffman; we also propose a simple phase space explanation for the appearance of the cyclopropyl photoionization spectrum. The results of this work allow the refinement of the cyclopropane C–H bond dissociation energy, in addition to the cyclopropyl radical and cation cyclization energies, via the Active Thermochemical Tables approach.
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Hamoudi, H., Berdiyorov, G. R., Zekri, A., Tong, Y., Mansour, S., Esaulov, V. A., & Youcef-Toumi, K. (2022). Building block 3D printing based on molecular self-assembly monolayer with self-healing properties. SCIENTIFIC REPORTS, 12(1), 6806.
Résumé: The spontaneous formation of biological substances, such as human organs, are governed by different stimuli driven by complex 3D self-organization protocols at the molecular level. The fundamentals of such molecular self-assembly processes are critical for fabrication of advanced technological components in nature. We propose and experimentally demonstrate a promising 3D printing method with self-healing property based on molecular self-assembly-monolayer principles, which is conceptually different than the existing 3D printing protocols. The proposed molecular building-block approach uses metal ion-mediated continuous self-assembly of organic molecular at liquid-liquid interfaces to create 2D and 3D structures. Using this technique, we directly printed nanosheets and 3D rods using dithiol molecules as building block units.
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Han, S., Schroder, M., Gatti, F., Meyer, H. - D., Lauvergnat, D., Yarkony DR, & Guo H. (2022). Representation of Diabatic Potential Energy Matrices for Multiconfiguration Time-Dependent Hartree Treatments of High-Dimensional Nonadiabatic Photodissociation Dynamics. J Chem Theory Comput, 18(8), 4627–4638.
Résumé: Conventional quantum mechanical characterization of photodissociation dynamics is restricted by steep scaling laws with respect to the dimensionality of the system. In this work, we examine the applicability of the multi-configurational time-dependent Hartree (MCTDH) method in treating nonadiabatic photodissociation dynamics in two prototypical systems, taking advantage of its favorable scaling laws. To conform to the sum-of-product form, elements of the ab initio diabatic potential energy matrix (DPEM) are re-expressed using the recently proposed Monte Carlo canonical polyadic decomposition method, with enforcement of proper symmetry. The MCTDH absorption spectra and product branching ratios are shown to compare well with those calculated using conventional grid-based methods, demonstrating its promise for treating high-dimensional nonadiabatic photodissociation problems.
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Harper, O. J., Chen, N. L., Boyé-Péronne, S., & Gans, B. (2022). Pulsed-Ramped-Field-Ionization ZEro-Kinetic-Energy PhotoElectron Spectroscopy: a methodological advance. Phys. Chem. Chem. Phys., 24, 2777.
Résumé: A new experimental method has been developed to record photoelectron spectra based on the well-established pulsed-field-ionization zero-kinetic-energy photoelectron spectroscopy technique and inspired by the data treatment employed in slow photoelectron spectroscopy. This method has been successfully applied to two well-known systems: the X+2Πg, 1/2 (v+=0) ← X 1Σ+g (v=0) and the X+1Σ+ (v+=2) ← X 2Π1/2 (v=0) ionizing transitions of CO2 and NO, respectively. The first results highlight several advantages of our technique such as an improved signal-to-noise ratio without degrading the spectral resolution and a direct field-free energy determination. The data obtained for NO indicate that this method might be useful for studying field-induced autoionization processes.
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Hearne, T. S., Mammez, M. - H., Mammez, D., Martin-Drumel, M. - A., Roy, P., Pirali, O., Eliet, S., Barbieri, S., Hindle, F., Mouret, G., & Lampin, J. - F. (2022). Unlocking synchrotron sources for THz spectroscopy at sub-MHz resolution. Opt. Express, 30(5), 7372–7382.
Résumé: Synchrotron radiation (SR) has proven to be an invaluable contributor to the field of molecular spectroscopy, particularly in the terahertz region (1-10 THz) where its bright and broadband properties are currently unmatched by laboratory sources. However, measurements using SR are currently limited to a resolution of around 30 MHz, due to the limits of Fourier-transform infrared spectroscopy. To push the resolution limit further, we have developed a spectrometer based on heterodyne mixing of SR with a newly available THz molecular laser, which can operate at frequencies ranging from 1 to 5.5 THz. This spectrometer can record at a resolution of 80 kHz, with 5 GHz of bandwidth around each molecular laser frequency, making it the first SR-based instrument capable of sub-MHz, Doppler-limited spectroscopy across this wide range. This allows closely spaced spectral features, such as the effects of internal dynamics and fine angular momentum couplings, to be observed. Furthermore, mixing of the molecular laser with a THz comb is demonstrated, which will enable extremely precise determinations of molecular transition frequencies.
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Ismail, I., Khalal, M. A., Huttula, M., J ankala, K., Bizau, J. - M., Cubaynes, D., Hikosaka, Y., Bucar, K., Zitnik, M., Andric, L., Lablanquie, P., Palaudoux, J., & Penent, F. (2022). A modified magnetic bottle electron spectrometer for the detection of multiply charged ions in coincidence with all correlated electrons: decay pathways to Xe(3+) above xenon-4d ionization threshold. Phys Chem Chem Phys, 34(24), 20219–20227.
Résumé: Single-photon multiple photoionization results from electron correlations that make this process possible beyond the independent electron approximation. To study this phenomenon experimentally, the detection in coincidence of all emitted electrons is the most direct approach. It provides the relative contribution of all possible multiple ionization processes, the energy distribution between electrons that can reveal simultaneous or sequential mechanisms, and, if possible, the angular correlations between electrons. In the present work, we present a new magnet design of our magnetic bottle electron spectrometer that allows the detection of multiply charged Xe(n+) ions in coincidence with n electrons. This new coincidence detection allows more efficient extraction of minor channels that are otherwise masked by random coincidences. The proof of principle is provided for xenon triple ionization.
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J.-P. Mosnier, E. T. Kennedy, D. Cubaynes, J.-M. Bizau, S. Guilbaud, M. F. Hasoğlu, C. Blancard, & T. W. Gorczyca. (2022). L-shell photoionization of Mg-like S4+ ions in ground and metastable states: Experiment and theory. Phys. Rev. A, (106), 033113.
Résumé: We report measurements of the absolute photoionization cross sections of magnesiumlike S4+ over the 158–280 eV photon energy range. The experiments were performed with the multianalysis ion apparatus at the SOLEIL synchrotron radiation facility. Single- and double-ionization ion yields produced by the photoionization of the 2p subshell of the S4+ both from the 2p63s21S0 ground state and the 2p53s3p3P0,1,2 metastable levels were observed, as well as 2s excitations. Theoretical calculations of the photoionization cross sections were carried out using multiconfiguration Dirac-Fock and R-matrix computer codes and the results are compared with the experimental data. While in general reasonably good agreement was found, notable differences in the strengths and positions of predicted resonances were observed and significant systematic energy shifts of the theoretical predictions were required.
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Jacovella, U., Buntine, J. T., Cotter, M., Muller, G., Scholz, M. S., & Dartois, E. (2022). On the possible contribution of cationic oxygenated carbon chains CnO+, HCnO+, and OCnO+ (n = 4 − 9) to the diffuse interstellar bands. Mon Not R Astron Soc, 511(4), 5171–5179.
Résumé: Only 4 of the diffuse interstellar bands (DIBs) are currently accounted for, ascribed to electronic transitions of C_{60}^+. Investigations into carriers of other DIBs historically focus on charged and neutral hydrocarbons, and little information is available regarding oxygenated carbon and hydrocarbon species that result from the two most abundant heavy elements in the interstellar medium, C and O. In this study, we assess whether CnO+, HCnO+, and OCnO+ (n = 4 − 9) cations are viable candidates to account for DIBs using both density-functional theory (DFT) and coupled cluster single-double and perturbative triple theory, CCSD(T). For these species, the linear structures are the most stable isomers with the lowest dissociation threshold corresponding to CO loss. Optical absorptions of the oxygenated carbon chain cations are characterized by calculated vertical excitation wavelengths and their corresponding oscillator strengths using the equation-of-motion CCSD (EOM-CCSD) method. Aside from HC4O+ and HC2n + 1O+, all of the species considered in this study have calculated electronic transitions that lie in the visible or near-infrared spectral regions. Minimal column densities necessary for these cations to account for DIBs have been estimated. Based on present results and the known column densities for neutral oxygenated carbon chains in TMC-1, the growth rate of charged O-bearing carbon chains via ion-neutral reaction mechanisms is judged to be too low to form a sufficient population to give rise to DIBs.
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Jacovella, U., Hansen, C. S., Giuliani, A., Trevitt, A. J., & Nahon, L. (2022). UV/VUV photo-processing of protonated N-hetero(poly)acenes. Mon Not R Astron Soc, 511(4), 5656–5660.
Résumé: N-heterocycles are suspected to play an important role in the chemical origin of life. Despite their detection in meteorites and in Titan’s atmosphere, their extra-terrestrial chemical formation networks remain elusive. Furthermore N-heterocyclics are undetected in the interstellar medium. This paper assesses the photostability of protonated N-hetero(poly)acenes after UV and VUV excitation. It provides information on their ability to retain the N atom into the cycle to generate larger N-containing species or functionalized N-heterocyles. Protonated N-hetero(poly)acenes were generated using electrospray ionization and injected into a linear ion trap where they were irradiated by radiation of 4.5 to 10 eV using the DESIRS beamline at the synchrotron SOLEIL. The photodissociation action spectra of protonated pyridine, quinoline, isoquinoline, and acridine were measured by recording the photofragment yields as a function of photon energy. The four systems exhibit dissociation channels associated with H2 and HCN/HNC loss but with different branching ratios. The results indicate that increasing the size of the N-hetero(poly)acenes increases the chance of retaining the N atom in the larger fragment ion after photodissociation but it remains that all the protonated N-hetero(poly)acenes studied lose their N atom at part of a small neutral photofragment, with high propensity. Therefore, protonated N-hetero(poly)acenes in interstellar space are unlikely precursors to form larger N-containing species. However, protonated pyridine, quinoline, isoquinoline, and acridine are most likely to retain their N atoms in planetary atmospheres where UV radiation at the planet’s surface is typically restricted to wavelengths greater than 200 nm – suggesting such environments are possible substrates for prebiotic chemistry.
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Jacovella, U., Noble, J. A., Guliani, A., Hansen, C. S., Trevitt, A. J., Mouzay, J., Couturier-Tamburelli, I., Pietri, N., & Nahon, L. (2022). Ultraviolet and vacuum ultraviolet photo-processing of protonated benzonitrile (C6H5CNH+). A&A, 657, A85.
Résumé: Context. The recent detection in pre-stellar sources of cyano-substituted and pure hydrocarbon cycles has emphasized the importance of aromatic chemistry in the earliest stages of star formation. Ultraviolet (UV) and vacuum-UV (VUV) radiation is ubiquitous in space and thus the photo-processing of small cyclic ions may open a window onto rich chemical networks and lead to the formation of larger aromatics in space.
Aims. The aim is to investigate the fate of protonated benzonitrile species after UV and VUV photoexcitation and the subsequent potential impact on stellar and interstellar chemistry.
Methods. Protonated benzonitrile was isolated in a linear ion trap prior to irradiation with UV and VUV radiation (4.5–13.6 eV) from the DESIRS beamline at synchrotron SOLEIL. The study was extended down to 3.5 eV using a cryogenic Paul ion trap coupled to an OPO laser at the PIIM laboratory. Photodissociation action spectra were obtained by monitoring the photofragment yields as a function of photon energy.
Results. The UV/VUV photodissociation action spectra of protonated benzonitrile show structured bands from 3.8 to 9 eV. The primary dissociation channel of protonated benzonitrile corresponds to HCN/HNC loss and formation of the phenylium cation (C6H5+); whereas at high energies, a minor channel is observed that correlates with HC3N loss and formation of C4H5+.
Conclusions. The UV and VUV photodestruction of protonated benzonitrile leads to the formation of a highly reactive cationic species, C6H5+, predicted to be an important precursor of larger aromatic molecules in space, such as polycyclic aromatic hydrocarbons. The inclusion of C6H5+ – a precursor of benzene and, by extension, of benzonitrile – as the result of formation via the photodissociation of protonated benzonitrile in current astrochemical models could improve the predicted abundance of benzonitrile, which is currently underestimated.
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Jähnigen, S., Le Barbu-Debus, K., Guillot, R., Vuilleumier, R., & Zehnacker, A. (2022). How Crystal Symmetry Dictates Non-Local Vibrational Circular Dichroism in the Solid State. Angew. Chem. Int. Ed., 62(e20221559).
Résumé: Abstract Solid-State Vibrational Circular Dichroism (VCD) can be used to determine the absolute structure of chiral crystals, but its interpretation remains a challenge in modern spectroscopy. In this work, we investigate the effect of a twofold screw axis on the solid-state VCD spectrum in a combined experimental and theoretical analysis of P21 crystals of (S)-(+)-1-indanol. Even though the space group is achiral, a single proper symmetry operation has an important impact on the VCD spectrum, which reflects the supramolecular chirality of the crystal. Distinguishing between contributions originating from molecular chirality and from chiral crystal packing, we find that while IR absorption hardly depends on the symmetry of the space group, the situation is different for VCD, where completely new non-local patterns emerge. Understanding the two underlying mechanisms, namely gauge transport and direct coupling, will help to use VCD to distinguish polymorphic forms.
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Jarraya, M., Bellili, A., Barreau, L., Cubaynes, D., Garcia, G. A., Poisson L, & Hochlaf M. (2022). Probing the dynamics of the photo-induced decarboxylation of neutral and ionic pyruvic acid. Faraday Discuss, 238, 266–294.
Résumé: The dynamics of the electronically excited pyruvic acid (PA) and of its unimolecular decomposition upon single photon ionisation are investigated by means of a table top fs laser and VUV synchrotron radiation. The latter is coupled with photo-ion/photo-electron coincidence acquisition devices that allow the identification of the ionic products coming from state-to-state fragmentation upon ionisation. The fs-based setup provides time-resolved mass spectra with 266 nm (= 4.661 eV) excitation and an 800 nm multiphoton probe. For interpretation, we carried out theoretical computations using a composite scheme combining density functional theory full molecular geometric optimisation and post-Hartree-Fock correction inclusion. We therefore determined the neutral and ionic species formed during these experiments and the corresponding dissociation channels. Although several PA isomers are found, we show that solely the most stable isomer of PA (i.e. Tc) is present in the molecular beam prior to ionisation. We determined its adiabatic ionisation energy (AIE = 10.031 +/- 0.005 eV). The fragmentation of the Tc(+) ion occurs at approximately 0.4 eV above the threshold and it is dominated by the CC bond breaking channel, forming the HOCO fragment in conjunction with the CH3CO(+) ion. The decarboxylation of Tc(+) channels has a minor contribution, although they are more favourable thermodynamically. These findings are in contrast with the dominance of decarboxylation while fragmenting Tc populated in the S1-S3 states. For explanation, we invoke an indirect process populating first a short lived autoionising neutral state located in energy at the HOCO + CH3CO(+) dissociation limit. Later on, fragmentation occurs, followed by autoionisation. On the other hand, the fs-based experiment does not reveal any appreciable dynamics for the Tc isomer of PA after a 266 nm excitation because of non-favourable Franck-Condon factors at this energy. In sum, our work highlights the importance of the couplings between the parent ion vibrational modes and the dissociative channels in the vicinity of the loss ionic fragmentation thresholds.
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Kerraouch, I., Kebukawa, Y., Bischoff, A., Zolensky, M. E., Wölfer, E., Hellmann, J. L., Ito, M., King, A., Trieloff, M., Barrat, J. - A., Schmitt-Kopplin, P., Pack, A., Patzek, M., Hanna, R. D., Fockenberg, T., Marrocchi, Y., Fries, M., Mathurin, J., Dartois, E., Duprat, J., Engrand, C., Deniset, A., Dazzi, A., Kiryu, K., Igisu, M., Shibuya, T., Wakabayashi, D., Yamashita, S., Takeichi, Y., Takahashi, Y., Ohigashi, T., Kodama, Y., & Kondo, M. (2022). Heterogeneous nature of the carbonaceous chondrite breccia Aguas Zarcas – Cosmochemical characterization and origin of new carbonaceous chondrite lithologies. Geochimica et Cosmochimica Acta, 334, 155–186.
Résumé: On April 23rd, 2019, the Aguas Zarcas meteorite fall occurred in Costa Rica. Because the meteorite was quickly recovered, it contains valuable extraterrestrial materials that have not been contaminated by terrestrial processes. Our X-ray computed tomography (XCT) and scanning electron microscopy (SEM) results on various pre-rain fragments from earlier work (Kerraouch et al., 2020; 2021) revealed several distinct lithologies: Two distinct metal-rich lithologies (Met-1 and Met-2), a CM1/2 lithology, a C1 lithology, and a brecciated CM2 lithology consisting of different petrologic types. Here, we further examined these lithologies in the brecciated Aguas Zarcas meteorite and report new detailed mineralogical, chemical, isotopic, and organic matter characteristics. In addition to petrographic differences, the lithologies also display different chemical and isotopic compositions. The variations in their bulk oxygen isotopic compositions indicate that the various lithologies formed in different environments and/or under diverse conditions (e.g., water/rock ratios). Each lithology experienced a different hydration period during its evolution. Together, this suggests that multiple precursor parent bodies may have been involved in these processes of impact brecciation, mixing, and re-assembly. The Cr and Ti isotopic data for both the CM1/2 and Met-1 lithology are consistent with those of other CM chondrites, even though Met-1 displays a significantly lower ε50Ti isotopic composition that may be attributable to sample heterogeneities on the bulk meteorite scale and may reflect variable abundances of refractory phases in the different lithologies of Aguas Zarcas. Finally, examination of the organic matter of the various lithologies also suggests no strong evidence of thermal events, but a short-term heating cannot completely be excluded. Raman parameters indicate that the peak temperature has been lower than that for Yamato-793321 (CM2, ∼400 °C). Considering the new information presented in this study, we now better understand the origin and formation history of the Aguas Zarcas daughter body.
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Koval, N. E., Sánchez-Portal, D., Borisov, A. G., & Díez Muiño, R. (2022). Time-dependent density functional theory calculations of electronic friction in non-homogeneous media. Phys. Chem. Chem. Phys., 24(34), 20239–20248.
Résumé: The excitation of low-energy electron–hole pairs is one of the most relevant processes in the gas–surface interaction. An efficient tool to account for these excitations in simulations of atomic and molecular dynamics at surfaces is the so-called local density friction approximation (LDFA). The LDFA is based on a strong approximation that simplifies the dynamics of the electronic system: a local friction coefficient is defined using the value of the electronic density for the unperturbed system at each point of the dynamics. In this work, we apply real-time time-dependent density functional theory to the problem of the electronic friction of a negative point charge colliding with spherical jellium metal clusters. Our non-adiabatic, parameter-free results provide a benchmark for the widely used LDFA approximation and allow the discussion of various processes relevant to the electronic response of the system in the presence of the projectile.
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Laurent, J., Bozek, J., Briant, M., Carcabal, P., Cubaynes, D., Milosavljevic, A., Puttner, R., Shafizadeh, N., Simon, M., Soep, B., & Goldsztejn, G. (2022). Consistent characterization of the electronic ground state of iron(II) phthalocyanine from valence and core-shell electron spectroscopy. Phys Chem Chem Phys, 4(24), 2656–2663.
Résumé: We studied the iron(II) phthalocyanine molecule in the gas-phase. It is a complex transition organometallic compound, for which, the characterization of its electronic ground state is still debated more than 50 years after the first published study. Here, we show that to determine its electronic ground state, one needs a large corpus of data sets and a consistent theoretical methodology to simulate them. By simulating valence and core-shell electron spectra, we determined that the ground state is a (3)E(g) and that the ligand-to-metal charge transfer has a large influence on the spectra.
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Le Barbu-Debus, K., Pérez-Mellor, A., Lepère, V., & Zehnacker, A. (2022). How change in chirality prevents β-amyloid type interaction in a protonated cyclic dipeptide dimer. PCCP, 24, 19783–19791.
Résumé: The protonated dimers of the diketopiperazine dipeptide cyclo (lPhe-lHis) and cyclo (lPhe-dHis) are studied by laser spectroscopy combined with mass spectrometry to shed light on the influence of stereochemistry on the clustering propensity of cyclic dipeptides. The marked spectroscopic differences experimentally observed in the hydride stretch region are well accounted for by the results of DFT calculations. Both diastereomeric protonated dimers involve a strong ionic hydrogen bond from the protonated imidazole ring of one monomer to the neutral imidazole nitrogen of the other. While this strong interaction is accompanied by a single NH⋯O hydrogen bond between the amide functions of the two moieties for the protonated dimer of cyclo (lPhe-dHis), that of cyclo (lPhe-lHis) involves two NH⋯O interactions, forming the motif of an antiparallel β sheet. Therefore, a change in chirality of the residue prevents the formation of the β sheet pattern observed in the amyloid type aggregation. These results emphasize the peculiar role of the histidine residue in peptide structure and interaction.
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Le Sech, C. (2022). Changes induced in a covalent bond confined in a structured cavity. Chemical Physics Letters, 791, 139396.
Résumé: A simple correlated wave function is proposed to study the confined hydrogen molecule. Three confinement structural forms are considered: a hard sphere, a cone, and a composite sphere-cone to simulate the effects of a structured cavity. The changes in the molecular energy, in particular the vibration, are calculated through a variational non Born-Oppenheimer approach.
In all three cases, a steep rise in the molecule energy is observed. The composite sphere-cone structure is the most efficient. A compression/relaxation cycle in such a cavity, produced by the conformational molecular dynamics, augments the energy. This finding could be of interest in chemical catalysis in supramolecular cavities.
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Lietard A, Piani G, Pollet R, Soep B, Mestdagh JM, & Poisson L. (2022). Excited state dynamics of normal dithienylethene molecules either isolated or deposited on an argon cluster. Phys Chem Chem Phys, 24, 10588–10598.
Résumé: Real-time dynamics of the electronically excited open-ring isomer of 1,2-bis(2-methylbenzo[b]thiophen-3-yl)perfluorocyclopentene (BTF6) and 1,2-bis(2,4-dimethyl-5-phenyl-3-thienyl)perfluorocyclopentene (PTF6) molecules was investigated using a set-up that associates a molecular beam, femtosecond lasers and velocity map imaging. The molecules were either free in the gas phase or bound to an argon cluster. DFT and TDDFT calculations were performed on BTF6. The calculated vertical excitation energies indicate an excitation by the pump laser towards a superposition of S5 and S6 states. The free molecule dynamics was found to follow a three wavepacket model. One describes the parallel conformer (P) of these molecules. It is unreactive with respect to the ring closure reaction which is responsible for the photochromic property of these molecules. It has no observable decay at the experiment time scale (up to 350 ps). The other two wavepackets describe the reactive antiparallel conformer (AP). They are formed by an early splitting of the wavepacket that was launched initially by the pump laser. They can be considered as generated by excitation of different, essentially uncoupled, deformation modes. They subsequently evolve along independent pathways. One is directed ballistically towards a conical intersection (CI) and decays through the CI to a potential energy surface where it can no longer be detected. The other fraction of the wavepacket decays also towards undetected states but in this case the driving mechanism is a non-adiabatic electronic relaxation within a potential well of the energy surfaces where it was launched. When BTF6 and PTF6 molecules are bound to an argon cluster, the same three wavepacket model applies. The vibronic relaxation timespan is enhanced by a factor 5 and a larger fraction of AP conformers follows this pathway. In contrast, the time constant associated with the ballistic movement is enhanced by only a factor of 2.
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Lucero Manzano, A. M., Fuhr, J. D., Cantero, E. D., Famá, M., Sánchez, E. A., Esaulov, V. E., & Grizzi, O. (2022). Hydroxylation of the Zn terminated ZnO(0 0 0 1) surface under vacuum conditions. APPLIED SURFACE SCIENCE, 572, 151271.
Résumé: Under vacuum conditions, the polar surface ZnO(0 0 0 1) evolves in time forming a layer with H and additional O which changes the top layer stoichiometry and other properties such as its work function. In this work we present a study of the evolution of the ZnO(0 0 0 1) surface in ultra-high vacuum performed with time of flight direct recoil spectroscopy to detect the adsorbed H and O, plus other standard techniques including photoelectron spectroscopy and low energy electron diffraction. The experimental results are complemented with density functional theory (DFT) calculations for surfaces perfectly terminated and with triangular defects plus O adatoms. We show that the ZnO surface reaches a stable condition at an OH coverage of around 0.25 ML. We also studied the effect of increasing the partial pressure of H2 and of H2O on the layer growth. We observe that during the formation of the OH layer the work function decreases. Analysis of this variation of the work function with DFT reveals the role of the O adatoms in the adsorption process. Finally we show that the OH coverage decreases continuously with the increase of the sample temperature, without showing a well-defined desorption peak, which is in agreement with earlier predictions of the thermodynamics evolution. We believe that the present results contribute to clarify the behavior of the ZnO(0 0 0 1) surface under vacuum and will be useful in future works, particularly where H cannot be detected by standard techniques.
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Mainali, S., Gatti, F., & Atabek, O. (2022). Laser control strategies in full-dimensional funneling dynamics: The case of pyrazine. Chin Opt Lett, 20(10), 100007.
Résumé: Motivated by the major role funneling dynamics plays in light-harvesting processes, we built some laser control strategies inspired from basic mechanisms such as interference and kicks, and applied them to the case of pyrazine. We are studying
the internal conversion between the two excited states, the highest and directly reachable from the initial ground state being considered as a donor and the lowest as an acceptor. The ultimate control objective is the maximum population
deposit in the otherwise dark acceptor from a two-step process: radiative excitation of the donor, followed by a conical-intersection-mediated funneling towards the acceptor. The overall idea is to first obtain the control field param-
eters (individual pulses leading frequency and intensity, duration, and inter-pulse time delay) for tractable reduced dimensional models basically describing the conical intersection branching space. Once these parameters are optimized, they are
fixed and used in full-dimensional dynamics describing the electronic population transfer. In the case of pyrazine, the reduced model is four-dimensional, whereas the full dynamics involves 24 vibrational modes. Within experimentally achiev-
able electromagnetic field requirements, we obtain a robust control with about 60% of the ground state population deposited in the acceptor state, while about 16% remains in the donor. Moreover, we anticipate a possible transposition to the
control of even larger molecular systems, for which only a small number of normal modes are active, among all the others acting as spectators in the dynamics.
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Mammez, M. - H., Buchanan, Z., Pirali, O., Martin-Drumel, M. - A., Turut, J., Ducournau, G., Eliet, S., Hindle, F., Barbieri, S., Roy, P., Mouret, G., & Lampin, J. - F. (2022). Optically Pumped Terahertz Molecular Laser: Gain Factor and Validation up to 5.5 THz. Adv. Photonics Res., 3(4), 2100263.
Résumé: Quantum cascade laser-pumped terahertz (THz) gas lasers are at the edge of revolutionizing THz science where powerful yet tunable sources have long been lacking. Maybe one of the last remaining drawbacks to a wider use of these instruments lies in the lack of available databases of potentially lasing transitions for users. A new figure of merit, the molecular gain?factor is proposed, that allows to discriminate transitions by their lasing potential. Using this factor, catalogs of THz laser lines of ammonia, both 14NH3 and 15NH3, up to 10?THz are reported. Demonstration of the use of these two catalogs, and of the pertinence of the molecular gain?factor, is made by experimentally observing 32 laser lines of 14NH3 and 5 lines of 15NH3 up to 5.5?THz. Prospects to generalize the use of this molecular gain?factor to a wide range of molecules are discussed.
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Mandal S, Gatti F, Bindech O, Marquardt R, & Tremblay JC. (2022). Multidimensional stochastic dissipative quantum dynamics using a Lindblad operator. J Chem Phys, 156, 094109.
Résumé: In this paper, multidimensional dissipative quantum dynamics is studied within a system-bath approach in the Markovian regime using a model Lindblad operator. We report on the implementation of a Monte Carlo wave packet algorithm in the Heidelberg version of the Multi-Configuration Time-Dependent Hartree (MCTDH) program package, which is henceforth extended to treat stochastic dissipative dynamics. The Lindblad operator is represented as a sum of products of one-dimensional operators. The new form of the operator is not restricted to the MCTDH formalism and could be used with other multidimensional quantum dynamical methods. As a benchmark system, a two-dimensional coupled oscillators model representing the internal stretch and the surface-molecule distance in the O2/Pt(111) system coupled to a Markovian bath of electron-hole-pairs is used. The simulations reveal the interplay between coherent intramolecular coupling due to anharmonic terms in the potential and incoherent relaxation due to coupling to an environment. It is found that thermalization of the system can be approximately achieved when the intramolecular coupling is weak.
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Mandal, S., Gatti, F., Bindech, O., Marquardt, R., & Tremblay, J. C. (2022). Stochastic multi-configuration time-dependent Hartree for dissipative quantum dynamics with strong intramolecular coupling. J Chem Phys, 157(144105).
Résumé: In this article, we explore the dissipation dynamics of a strongly coupled multidimensional system in contact with a Markovian bath, following a system-bath approach. We use in this endeavor the recently developed stochastic multi-configuration time-dependent Hartree approach within the Monte Carlo wave packet formalism [S. Mandal et al., J. Chem. Phys. 156, 094109 (2022)]. The method proved to yield thermalized ensembles of wave packets when intramolecular coupling is weak. To treat strongly coupled systems, new Lindblad dissipative operators are constructed as linear combinations of the system coordinates and associated momenta. These are obtained by a unitary transformation to a normal mode representation, which reduces intermode coupling up to second order. Additionally, we use combinations of generalized raising/lowering operators to enforce the Boltzmann distribution in the dissipation operators, which yield perfect thermalization in the harmonic limit. The two ansatz are tested using a model two-dimensional Hamiltonian, parameterized to disentangle the effects of intramolecular potential coupling, of strong mode mixing observed in Fermi resonances, and of anharmonicity.
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Marlton, S. J. P., Buntine, J. T., Liu, C., Watkins, P., Jacovella, U., Carrascosa, E., Bull, J. N., & Bieske, E. J. (2022). Disentangling Electronic Spectra of Linear and Cyclic Hydrogenated Carbon Cluster Cations, C2n+1H+ (n = 3–10). The Journal of Physical Chemistry A, 126(38), 6678–6685.
Résumé: Electronic spectra are measured for protonated carbon clusters (C2n+1H+) containing between 7 and 21 carbon atoms. Linear and cyclic C2n+1H+ isomers are separated and selected using a drift tube ion mobility stage before being mass selected and introduced into a cryogenically cooled ion trap. Spectra are measured using a two-color resonance-enhanced photodissociation strategy, monitoring C2n+1+ photofragments (H atom loss channel) as a function of excitation wavelength. The linear C7H+, C9H+, C11H+, C13H+, C15H+, and C17H+ clusters, which are predicted to have polyynic structures, possess sharp 11Σ+ ← X̃1Σ+ transitions with well-resolved vibronic progressions in C–C stretch vibrational modes. The vibronic features are reproduced by spectral simulations based on vibrational frequencies and geometries calculated with time-dependent density functional theory (ωB97X-D/cc-pVDZ level). The cyclic C15H+, C17H+, C19H+, and C21H+ clusters exhibit weak, broad transitions at a shorter wavelength compared to their linear counterparts. Wavelengths for the origin transitions of both linear and cyclic isomers shift linearly with the number of constituent carbon atoms, indicating that in both cases, the clusters possess a common structural motif.
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Mathurin, J., Deniset-Besseau, A., Bazin, D., Dartois, E., Wagner, M., & Dazzi, A. (2022). Photothermal AFM-IR spectroscopy and imaging: Status, challenges, and trends. Journal of Applied Physics, 131, 010901.
Résumé: This article focuses on the atomic force microscopy-infrared (AFM-IR) technique and its recent technological developments. Based on the detection of the photothermal sample expansion signal, AFM-IR combines the high spatial resolution of atomic force microscopy with the chemical identification capability of infrared spectroscopy to achieve submicrometric physico-chemical analyses. Since the first publication in 2005, technological improvements have dramatically advanced the capabilities of AFM-IR in terms of spatial and spectral resolution, sensitivity, and fields of applications. The goal of this paper is to provide an overview of these developments and ongoing limitations. We summarize recent progress in AFM-IR implementations based on the major AFM contact, tapping, and peak force tapping modes. Additionally, three new trends are presented, namely, AFM-IR applied to mineral samples, in fluid and a novel, purely surface sensitive AFM-IR configuration, to probe top layers. These trends demonstrate the immense potential of the technique and offer a good insight into the scope of AFM-IR.
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Matthaei CT, Mukhopadhyay DP, Roder A, Poisson L, & Fischer I. (2022). Photodissociation of the trichloromethyl radical: photofragment imaging and femtosecond photoelectron spectroscopy. Phys Chem Chem Phys, 2(24), 928–940.
Résumé: Halogen-containing radicals play a key role in catalytic reactions leading to stratospheric ozone destruction, thus their photochemistry is of considerable interest. Here we investigate the photodissociation dynamics of the trichloromethyl radical, CCl3 after excitation in the ultraviolet. While the primary processes directly after light absorption are followed by femtosecond-time resolved photoionisation and photoelectron spectroscopy, the reaction products are monitored by photofragment imaging using nanosecond-lasers. The dominant reaction is loss of a Cl atom, associated with a CCl2 fragment. However, the detection of Cl atoms is of limited value, because in the pyrolysis CCl2 is formed as a side product, which in turn dissociates to CCl + Cl. We therefore additionally monitored the molecular fragments CCl2 and CCl by photoionisation at 118.2 nm and disentangled the contributions from various processes. A comparison of the CCl images with control experiments on CCl2 suggest that the dissociation to CCl + Cl2 contributes to the photochemistry of CCl3.
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Mery, M., González-Fuentes, C., Romanque-Albornoz, C., García, C., León, A. M., Arista, N. R., Esaulov, V. A., & Valdés, J. E. (2022). The free electron model and the electronic energy losses of protons at low velocities interacting with polycrystalline tantalum. RADIATION EFFECTS AND DEFECTS IN SOLIDS, 177(1-2), 161–172.
Résumé: In this letter, we report experimental data and theoretical work on the electronic energy loss and energy loss straggling of protons transmitted through self-supported thin films of tantalum in a polycrystalline tetragonal phase (beta-Ta). Low-energy protons with energies below 10 keV and Ta films with nominal thickness of 6, 9 and 12 nm are used. The aim of this work is to understand the unexpected values of the Ta stopping power for low-energy proton backscattering reported recently, which are far from the prediction of the standard free electron gas model and semi-empirical approaches. This had led the authors to conclude the failure of the free electron model. Our transmission measurements confirm these experimental results. In this work, a qualitative discussion and quantitative explanation of our experimental results is given, using an approach based on the density functional theory within the framework of the free electron gas (FEG) model. We performed semiclassical deterministic trajectory simulations and employ the local density approximation model, using an inhomogeneous electron density distribution and the polycrystalline character of Ta samples.
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Pan, P., Debiossac, M., & Roncin, P. (2022). Temperature dependence in fast-atom diffraction at surfaces. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 24(20), 12319–12328.
Résumé: Grazing incidence fast atom diffraction at crystal surfaces (GIFAD or FAD) has demonstrated coherent diffraction both at effective energies close to one eV (lambda( perpendicular) approximately 14 pm for He) and at elevated surface temperatures offering high topological resolution and real time monitoring of growth processes. This is explained by a favorable Debye-Waller factor specific to the multiple collision regime of grazing incidence. This paper presents the first extensive evaluation of the temperature behavior between 177 and 1017 K on a LiF surface. Similarly to diffraction at thermal energies (TEAS), an exponential attenuation of the elastic intensity is observed but, contrarily to TEAS, the maximum coherence is not directly reduced by the attraction forces that increase the effective impact energy. It is more influenced by the surface stiffness and appears very sensitive to surface defects.
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Pan, P., Rad, J. N., & Roncin, P. (2022). A setup for grazing incidence fast atom diffraction. REVIEW OF SCIENTIFIC INSTRUMENTS, 93(9), 093305.
Résumé: We describe a UHV setup for grazing incidence fast atom diffraction (GIFAD) experiments. The overall geometry is simply a source of keV atoms facing an imaging detector. Therefore, it is very similar to the geometry of reflection high energy electron diffraction experiments used to monitor growth at surfaces. Several custom instrumental developments are described making GIFAD operation efficient and straightforward. The difficulties associated with accurately measuring the small scattering angle and the related calibration are carefully analyzed.
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Peña Román, R. J., Bretel, R., Pommier, D., Parra López, L. E., Lorchat, E., Boer-Duchemin, E., Dujardin, G., Borisov, A. G., Zagonel, L. F., Schull, G., Berciaud, S., & Le Moal, E. (2022). Tip-Induced and Electrical Control of the Photoluminescence Yield of Monolayer WS2. Nano Lett., 22(23), 9244–9251.
Résumé: The photoluminescence (PL) of monolayer tungsten disulfide (WS2) is locally and electrically controlled using the nonplasmonic tip and tunneling current of a scanning tunneling microscope (STM). The spatial and spectral distribution of the emitted light is determined using an optical microscope. When the STM tip is engaged, short-range PL quenching due to near-field electromagnetic effects is present, independent of the sign and value of the bias voltage applied to the tip–sample tunneling junction. In addition, a bias-voltage-dependent long-range PL quenching is measured when the sample is positively biased. We explain these observations by considering the native n-doping of monolayer WS2 and the charge carrier density gradients induced by electron tunneling in micrometer-scale areas around the tip position. The combination of wide-field PL microscopy and charge carrier injection using an STM opens up new ways to explore the interplay between excitons and charge carriers in two-dimensional semiconductors.
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Peña Román, R. J., Pommier, D., Bretel, R., Parra López, L. E., Lorchat, E., Chaste, J., Ouerghi, A., Le Moal, S., Boer-Duchemin, E., Dujardin, G., Borisov, A. G., Zagonel, L. F., Schull, G., Berciaud, S., & Le Moal, E. (2022). Electroluminescence of monolayer WS2 in a scanning tunneling microscope: Effect of bias polarity on spectral and angular distribution of emitted light. Phys. Rev. B, 106, 085419.
Résumé: Inelastic electron tunneling in a scanning tunneling microscope is used to generate excitons in monolayer tungsten disulfide (WS2). Excitonic electroluminescence is measured both at positive and negative sample bias. Using optical spectroscopy and Fourier-space optical microscopy, we show that the bias polarity of the tunnel junction determines the spectral and angular distribution of the emitted light. At positive sample bias, only emission from excitonic species featuring an in-plane transition dipole moment is detected. Based on the spectral distribution of the emitted light, we infer that the dominant contribution is from charged excitons, i.e., trions. At negative sample bias, additional contributions from lower-energy excitonic species are evidenced in the emission spectra and the angular distribution of the emitted light reveals a mixed character of in-plane and out-of-plane transition dipole moments.
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Perez-Mellor, A. F., Spezia, R., & Zehnacker, A. (2022). How Symmetry Influences the Dissociation of Protonated Cyclic Peptides. Symmetry, 14(4), 679.
Résumé: Protonated cyclic dipeptides undergo collision-induced dissociation, and this reaction mechanism strongly depends on the symmetry and the nature of the residues. We review the main dissociation mechanism for a series of cyclic dipeptides, obtained through chemical dynamics simulations. The systems range from the symmetrical cyclo-(glycyl-glycyl), with two possible symmetrical protonation sites located on the peptide ring, to cyclo-(tyrosyl-prolyl), where the symmetry of protonation sites on the peptide ring is broken by the dissimilar nature of the different residues. Finally, cyclo-(phenylalanyl-histidyl) shows a completely asymmetric situation, with the proton located on one of the dipeptide side chains, which explains the peculiar fragmentation mechanism induced by shuttling the proton, whose efficiency is strongly dependent on the relative chirality of the residues.
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PI Team:, Berné, O., Habart, É., Peeters, E., Core Team:, Abergel, A., Bergin, E. A., Bernard-Salas, J., Bron, E., Cami, J., Dartois, E., Fuente, A., Goicoechea, J. R., Gordon, K. D., Okada, Y., Onaka, T., Robberto, M., Röllig, M., Tielens, A. G. G. M., Vicente, S., Wolfire, M. G., Extended Core Team:, Alarcón, F., Boersma, C., Canin, A., Chown, R., Dicken, D., Languignon, D., Le Gal, R., Pound, M. W., Trahin, B., Simmer, T., Sidhu, A., Van De Putte, D., One-time co-authors contributed to SEPs, Cuadrado, S., Guilloteau, C., Maragkoudakis, A., Schefter, B. R., Schirmer, T., Collaborators:, Cazaux, S., Aleman, I., Allamandola, L., Auchettl, R., Antonio Baratta, G., Bejaoui, S., Bera, P. P., Bilalbegović, G., Black, J. H., Boulanger, F., Bouwman, J., Brandl, B., Brechignac, P., Brünken, S., Burkhardt, A., Candian, A., Cernicharo, J., Chabot, M., Chakraborty, S., Champion, J., Colgan, S. W. J., Cooke, I. R., Coutens, A., Cox, N. L. J., Demyk, K., Donovan Meyer, J., Engrand, C., Foschino, S., García-Lario, P., Gavilan, L., Gerin, M., Godard, M., Gottlieb, C. A., Guillard, P., Gusdorf, A., Hartigan, P., He, J., Herbst, E., Hornekaer, L., Jäger, C., Janot-Pacheco, E., Joblin, C., Kaufman, M., Kemper, F., Kendrew, S., Kirsanova, M. S., Klaassen, P., Knight, C., Kwok, S., Labiano, Á., Lai, T. S. - Y., Lee, T. J., Lefloch, B., Le Petit, F., Li, A., Linz, H., Mackie, C. J., Madden, S. C., Mascetti, J., McGuire, B. A., Merino, P., Micelotta, E. R., Misselt, K., Morse, J. A., Mulas, G., Neelamkodan, N., Ohsawa, R., Omont, A., Paladini, R., Elisabetta Palumbo, M., Pathak, A., Pendleton, Y. J., Petrignani, A., Pino, T., Puga, E., Rangwala, N., Rapacioli, M., Ricca, A., Roman-Duval, J., Roser, J., Roueff, E., Rouillé, G., Salama, F., Sales, D. A., Sandstrom, K., Sarre, P., Sciamma-O’Brien, E., Sellgren, K., Shannon, M. J., Shenoy, S. S., Teyssier, D., Thomas, R. D., Togi, A., Verstraete, L., Witt, A. N., Wootten, A., Ysard, N., Zettergren, H., Zhang, Y., Zhang, Z. E., & Zhen, J. (2022). PDRs4All: A JWST Early Release Science Program on Radiative Feedback from Massive Stars. Publications of the Astronomical Society of the Pacific, 134(1035), 054301.
Résumé: Massive stars disrupt their natal molecular cloud material through radiative and mechanical feedback processes. These processes have profound effects on the evolution of interstellar matter in our Galaxy and throughout the universe, from the era of vigorous star formation at redshifts of 1–3 to the present day. The dominant feedback processes can be probed by observations of the Photo-Dissociation Regions (PDRs) where the far-ultraviolet photons of massive stars create warm regions of gas and dust in the neutral atomic and molecular gas. PDR emission provides a unique tool to study in detail the physical and chemical processes that are relevant for most of the mass in inter- and circumstellar media including diffuse clouds, proto-planetary disks, and molecular cloud surfaces, globules, planetary nebulae, and star-forming regions. PDR emission dominates the infrared (IR) spectra of star-forming galaxies. Most of the Galactic and extragalactic observations obtained with the James Webb Space Telescope (JWST) will therefore arise in PDR emission. In this paper we present an Early Release Science program using the MIRI, NIRSpec, and NIRCam instruments dedicated to the observations of an emblematic and nearby PDR: the Orion Bar. These early JWST observations will provide template data sets designed to identify key PDR characteristics in JWST observations. These data will serve to benchmark PDR models and extend them into the JWST era. We also present the Science-Enabling products that we will provide to the community. These template data sets and Science-Enabling products will guide the preparation of future proposals on star-forming regions in our Galaxy and beyond and will facilitate data analysis and interpretation of forthcoming JWST observations.
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Raphaël Thon, Wutharath Chin, Didier Chamma, Mindaugas Jonusas, Jean-Pierre Galaup, & Claudine Crépin. (2022). Vibrational dynamics of iron pentacarbonyl in cryogenic matrices. J Chem Phys, 156(2), 024301-12.
Résumé: Iron pentacarbonyl is a textbook example of fluxionality. We trap the molecule in cryogenic matrices to study the vibrational dynamics of
CO stretching modes involved in the fluxional rearrangement. The infrared spectrum in Ar and N2 is composed of about ten narrow bands
in the spectral range of interest, indicating the population of various lattice sites and a lowering of the molecular symmetry in the trapping
sites. The vibrational dynamics is explored by means of infrared stimulated photon echoes at the femtosecond scale. Vibrational dephasing
and population relaxation times are obtained. The non-linear signals exhibit strong oscillations useful to disentangle the site composition
of the absorption spectrum. The population relaxation involves at least two characteristic times. An evolution of the photon echo signals
with the waiting time is observed. The behavior of all the signals can be reproduced within a simple model that describes the population
relaxation occurring in two steps: relaxation of v = 1 (population time T1 < 100 ps) and return to v = 0 (recovery time > 1 ns). These two steps
explain the evolution of the oscillations with the waiting time in the photon echo signals. These results discard fluxional rearrangement on
the time scale of hundreds of ps in our samples. Dephasing times are of the same order of magnitude as T1: dephasing processes due to the
matrix environment are rather inefficient. The photon echo experiments also reveal that intermolecular resonant vibrational energy transfers
between guest molecules occur at the hundreds of ps time scale in concentrated samples (guest/host > 104).
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Rosławska, A., Neuman, T., Doppagne, B., Borisov, A. G., Romeo, M., Scheurer, F., Aizpurua, J., & Schull, G. (2022). Mapping Lamb, Stark, and Purcell Effects at a Chromophore-Picocavity Junction with Hyper-Resolved Fluorescence Microscopy. Phys. Rev. X, 12, 011012.
Résumé: The interactions of the excited states of a single chromophore with static and dynamic electric fields spatially varying at the atomic scale are investigated in a joint experimental and theoretical effort. In this configuration, the spatial extension of the fields confined at the apex of a scanning tunneling microscope tip is smaller than that of the molecular exciton, a property used to generate fluorescence maps of the chromophore with intramolecular resolution. Theoretical simulations of the electrostatic and electrodynamic interactions occurring at the picocavity junction formed by the chromophore, the tip, and the substrate reveal the key role played by subtle variations of Purcell, Lamb, and Stark effects. They also demonstrate that hyper-resolved fluorescence maps of the line shift and linewidth of the excitonic emission can be understood as images of the static charge redistribution upon electronic excitation of the molecule and as the distribution of the dynamical charge oscillation associated with the molecular exciton, respectively.
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Sathanikan, A., Ceccone, G., Bañuls-Ciscar, J., Pan, M., Kamal, F., Bsaibess, T., Gaucher, A., Prim, D., Méallet-Renault, R., Colpo, P., Amigoni, S., Guittard, F., & Darmanin, T. (2022). A bioinspired approach to fabricate fluorescent nanotubes with strong water adhesion by soft template electropolymerization and post-grafting. Journal of Colloid and Interface Science, 606(1), 236–247.
Résumé: Hypothesis
In this original work, we aim to control both the surface wetting and fluorescence properties of extremely ordered and porous conducting polymer nanotubes prepared by soft template electropolymerization and post-grafting. For reaching this aim, various substituents of different hydrophobicity and fluorescence were post-grafted and the post-grafting yields were evaluated by surface analyses. We show that the used polymer is already fluorescent before post-grafting while the post-grafting yield and as a consequence the surface hydrophobicity highly depend on the substituent.
Experiments
Here, we have chosen to chemically grafting various fluorinated and aromatic substituents using a post-grafting in order to keep the same surface topography. Flat conducting polymer surfaces with similar properties have been also prepared for determining the surface energy with the Owens-Wendt equation and estimating the post-grafting yield by X-ray Photoemission Spectroscopy (XPS) and Time of Flight Secondary Emission Spectrometry (ToF-SIMS). For example, using fluorinated chains of various length (C4F9, C6F13 and C8F17), it is demonstrated that the surface hydrophobicity and oleophobicity do not increase with the fluorinated chain length due to the different post-grafting yields and because of the presence of nanoroughness after post-grafting.
Findings
These surfaces have high apparent water contact angle up to 130.5° but also strong water adhesion, comparable to rose petal effect even if there are no nanotubes on petal surface. XPS and ToF-SIMS analyses provided a detailed characterisation of the surface chemistry with a qualitative classification of the grafted surfaces (F6 > F4 > F8). SEM analysis shows that grafting does not alter the surface morphology. Finally, fluorescence analyses show that the polymer surfaces before post-treatment are already nicely fluorescent. Although the main goal of this paper was and is to understand the role of surface chemistry in tailoring the wetting properties of these surfaces rather than provide specific application examples, we believe that the obtained results can help the development of specific nanostructured materials for potential applications in liquid transport, or in stimuli responsive antimicrobial surfaces.
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Schroder, M., Gatti F, Lauvergnat D, Meyer HD, & Vendrell O. (2022). The coupling of the hydrated proton to its first solvation shell. Nat Commun, 13(6170).
Résumé: The Zundel and Eigen cations play an important role as intermediate structures for proton transfer processes in liquid water. In the gas phase they exhibit radically different infrared (IR) spectra. The question arises: is there a least common denominator structure that explains the IR spectra of both, the Zundel and Eigen cations, and hence of the solvated proton? Full dimensional quantum simulations of these protonated cations demonstrate that two dynamical water molecules and an excess proton constitute this fundamental subunit. Embedded in the static environment of the parent Eigen cation, this subunit reproduces the positions and broadenings of its main excess-proton bands. In isolation, its spectrum reverts to the well-known Zundel ion. Hence, the dynamics of this subunit polarized by an environment suffice to explain the spectral signatures and anharmonic couplings of the solvated proton in its first solvation shell.
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Sengupta, S., Monteverde, M., Murani, A., Marrache-Kikuchi, C., Santander-Syro, A. F., & Fortuna, F. (2022). Density-tuned isotherms and dynamic change at the superconducting transition in a gate-controlled AlOxSrTiO3 heterostructure. PHYSICAL REVIEW B, 105(12), 125112.
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Shao, F., Woo, S. Y., Wu, N., Schneider, R., Mayne, A. J., de Vasconcellos, S. M., Arora, A., Carey, B. J., Preuß, J. A., Bonnet, N., Och, M., Mattevi, C., Watanabe, K., Taniguchi, T., Niu, Z., Bratschitsch, R., & Tizei, L. H. G. (2022). Substrate influence on transition metal dichalcogenide monolayer exciton absorption linewidth broadening. Physical Review Materials, 6, 074005.
Résumé: The excitonic states of transition metal dichalcogenide (TMD) monolayers are heavily influenced by their external dielectric environment and depend on the substrate used. In this work, various wide band gap dielectric materials, namely hexagonal boron nitride (h−BN) and amorphous silicon nitride (Si3N4), under different configurations as support or encapsulation material for WS2 monolayers, are investigated to disentangle the factors contributing to inhomogeneous broadening of exciton absorption lines in TMDs using electron energy loss spectroscopy in a scanning transmission electron microscope. In addition, monolayer roughness in each configuration was determined from tilt series of electron diffraction patterns by assessing the broadening of diffraction spots by comparison with simulations. From our experiments, the main factors that play a role in linewidth broadening can be classified, in increasing order of importance, by monolayer roughness, surface cleanliness, and substrate-induced charge trapping. Furthermore, because high-energy electrons are used as a probe, electron-beam-induced damage on bare TMD monolayers is also revealed to be responsible for irreversible linewidth increases. h−BN not only provides clean surfaces of TMD monolayers and minimal charge disorder, but can also protect the TMD from irradiation damage. This work provides a better understanding of the mechanisms by which h−BN remains, to date, the most compatible material for 2D material encapsulation, facilitating the realization of intrinsic material properties to their full potential.
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Shi, Y., Yin, L., Ding, B., Song, X., Zhang, L., Guo, Y., Chen, L., Chen, X., Melkozerova, J. A., Klavsyuk, A. L., Gainullin, I. K., & Esaulov, V. A. (2022). Thickness-dependent neutralization of low-energy alkali-metal ions scattering on graphene. PHYSICAL REVIEW A, 105(4), 042807.
Résumé: A challenging effort is under way to understand the essence of the quantum size effect of two-dimensional materials in order to achieve the ultimate goal of arbitrarily tailoring their properties in the near future. Here we present experimental and theoretical study of resonant neutralization of low-energy alkali-metal ions on clean and graphene-covered polycrystalline copper surfaces. The ion neutralization strongly depends on the number of graphene layers, and it gradually saturates for three to five layers of graphene. This result is consistent with that for the graphite surface. The neutral fraction for the clean polycrystalline copper surface is found to be significantly higher than that for the graphene-covered surface, which is not consistent with known regularities. We quantitatively explain those observations through the small energy level width of resonant electron transfer that is determined by the special electronic structure of graphene layers. This finding indicates that resonant neutralization spectroscopy has promising applications in the detection of the quantum size effects of two-dimensional materials at an atomic layer level.
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Si, Y., Grazon, C., Clavier, G., Audibert, J. - F., Sclavi, B., & Méallet-Renault, R. (2022). FRET-mediated quenching of BODIPY fluorescent nanoparticles by methylene blue and its application to bacterial imaging. Photochemical & Photobiological Sciences, 21, 1249–1255.
Résumé: High resolution and a good signal to noise ratio are a requirement in cell imaging. However, after labelling with fluorescent entities, and after several washing steps, there is often an unwanted fluorescent background that reduces the images resolution. For this purpose, we developed an approach to remove the signal from extra-cellular fluorescent nanoparticles (FNPs) during bacteria imaging, without the need for any washing steps. Our idea is to use methylene blue to quench > 90% of the emission of BODIPY-based fluorescent polymer nanoparticle by a FRET process. This “Hide-and-Seek Game” approach offers a novel strategy to apply fluorescence quenching in bioimaging to improve image accuracy.
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Song, Q., Zhang, X., Gatti, F., Miao, Z., Zhang, Q., & Meng, Q. (2022). Multilayer Multiconfiguration Time-Dependent Hartree Study on the Mode-/Bond-Specific Quantum Dynamics of Water Dissociation on Cu(111). J Phys Chem A, 126(36), 6047–6058.
Résumé: In this work, full-dimensional (9D) quantum dynamics calculations on mode-/bond-specific surface scattering of a water molecule on a copper (111) rigid surface are performed through the multilayer multiconfiguration time-dependent Hartree (ML-MCTDH) method. To easily perform the ML-MCTDH calculations on such a triatomic molecule-surface system, we first choose specific Jacobi coordinates as a set of coordinates of water. Next, to efficiently perform the 9D ML-MCTDH wavepacket propagation, the potential energy surface is transferred to a canonical polyadic decomposition form with the aid of a Monte Carlo-based method. Excitation-specific dissociation probabilities of H2O on Cu(111) are computed, and mode-/bond-specific dynamics are demonstrated by comparison with a probability curve computed for a water molecule in the ground state. The dependence of the dissociation probability of the initial state of H2O is studied, and it is found that the excitation-specific dissociation probabilities can be divided into three groups. We find that the vibrationally excited states enhance the dissociation reactivity of H2O, while the rotationally excited states hardly influence it.
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Szczepaniak, U., Kolos, R., Guillemin, J. - C., & Crépin, C. (2022). Phosphorescence of C5N– in rare gas solids. Photochem, 2, 263–271.
Résumé: Phosphorescence of C5N– was discovered following the ArF-laser (193 nm) photolysis of cy-anodiacetylene (HC5N) isolated in cryogenic argon, krypton and xenon matrices. This visible emission, with the origin around 460 nm, is vibrationally resolved, permitting the measurement of frequencies for eight ground-state fundamental vibrational modes, including the three known from previous IR absorption studies. Phosphorescence lifetime amounts to tens or even hun-dreds of ms depending on the matrix host; it is 5 times longer than in the case of HC5N.
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Tamassia, F., Bizzocchi, L., Melosso, M., Martin-Drumel, M. - A., Pirali, O., Pietropolli Charmet, A., Canè, E., Dore, L., Gordon, I. E., Guillemin, J. - C., Giuliano, B. M., Caselli, P., Alessandrini, S., Barone, V., & Puzzarini, C. (2022). Synchrotron-based far-infrared spectroscopy of HC3N: Extended ro-vibrational analysis and new line list up to 3360 cm−1. Journal of Quantitative Spectroscopy and Radiative Transfer, 279, 108044.
Résumé: The far-infrared spectrum of HC3N has been recorded at high resolution between 70 and 500 cm−1using synchrotron radiation. Four prominent features, i.e., ν7, ν6−ν7, ν4−ν6, and 2ν7 have been identified in the spectrum together with many associated hot bands. In addition, rotational transitions for the interacting v4=v7=1, (v6=2,v7=1), (v5=1,v7=2), and v7=5 vibrationally excited states have been recorded in the millimeter/submillimeter region. The newly assigned transitions, together with those reported previously, form a comprehensive data set including about 17 000 transitions, which involves almost all the vibrational states of HC3N lying below 1300 cm−1 plus some excited states with energies between 2075 and 3550 cm−1. These data have been fitted to an effective Hamiltonian which takes into account rotational and vibrational l-type resonance effects, together with a number of anharmonic interaction terms. On average, all the analysed data are reproduced within the experimental accuracy. About 90 000 rotational and ro-vibrational transition frequencies have been computed on the basis of the spectroscopic constants obtained from the global fit in order to support data interpretation and astronomical searches in the interstellar medium and planetary atmospheres. Part of these data is included in the 2020 release of the HITRAN database.
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Thébault, P., Ammoun, M., Boudjemaa, R., Ouvrard, A., Steenkeste, K., Bourguignon, B., & Fontaine-Aupart, M. - P. (2022). Surface functionalization strategy to enhance the antibacterial effect of nisin Z peptide. Surf. Interfaces, 30, 101822.
Résumé: One of the main challenges when building antibacterial surfaces with antimicrobial peptides (AMPs) is to preserve their antimicrobial activity after stable immobilization of the peptides. Among all parameters, order/conformation of self-assembled monolayers, used as spacer, is one the most important. Herein we report the covalent immobilization of the nisin Z peptide on a gold surface functionalized with a self-assembled monolayer of 11-mercaptoundecanoic acid (MUA) alone or mixed with 6-mercaptohexanol, used as a spacer. The MUA acid is activated by treatment with carbodiimide/N-hydroxysuccinimidine and then reacts with nisin Z to form amide bonds via the N terminal part of the peptide. We have characterized each step of the surface modification using X-ray photoelectron spectroscopy, FTIR-ATR spectroscopy and contact angle measurements. The combined results show the success of each functionalization step. Additionally, SFG brings information on the orientation and conformational ordering of the self-assembled monolayers. Indeed, a better order of MUA25 layers compared to MUA was observed due to the spacing of carboxylic acid groups. The antibacterial activity of the immobilized AMPs against Staphylococcus aureus is evaluated using confocal microscopy and bacterial counting: it increases with a better order of the SAMs rather than a greater peptide concentration. This study provides fundamental insights on how to engineer AMPs and substrate to produce efficient biocidal surfaces.
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Ural, M. S., Dartois, E., Mathurin, J., Desmaële, D., Collery, P., Dazzi, A., Deniset-Besseau, A., & Gref, R. (2022). Quantification of drug loading in polymeric nanoparticles using AFM-IR technique: a novel method to map and evaluate drug distribution in drug nanocarriers. Analyst, 147, 5564–5578.
Résumé: Researchers are increasingly thinking smaller to solve some of the biggest challenges in nanomedicine: the control of drug encapsulation. Although recent years have witnessed a significant increase in the development and characterization of polymeric drug nanocarriers, several key features are still to be addressed: Where is the drug located within each nanoparticle (NP)? How much drug does each NP contain? Is the drug loading homogeneous on an individual NP basis? To answer these questions, individual NP characterization was achieved here by using atomic force microscopy-infrared spectroscopy (AFM-IR). A label-free quantification methodology was proposed to estimate with a nanoscale resolution the drug loadings of individual poly(lactic acid) (PLA) NPs loaded with an anticancer drug. First, a drug loading calibration curve was established using conventional IR microspectroscopy employing PLA/drug homogeneous films of well-known compositions. Then, single NPs were investigated by AFM-IR acquiring both IR mappings of PLA and drug as well as local IR spectra. Besides, drug location within single NPs was unravelled. The measured drug loadings were drastically different (0 to 21 wt%) from one NP to another, emphasizing the particular interest of this methodology in providing a simple quantification method for the quality control of nanomedicines.
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Vigneau, J. - N., Nguyen-Dang, T. - T., Charron, E., & Atabek, O. (2022). Strong-field molecular ionization beyond the single active electron approximation. J Chem Phys, 157, 134304.
Résumé: This work explores quantitative limits to the single-active electron approximation, often used to deal with strong-field ionization and subsequent attosecond dynamics. Using a time-dependent, multiconfiguration approach, specifically the time-dependent configuration interaction method, we solve the time-dependent Schrodinger equation for the two-electron dihydrogen molecule with the possibility of tuning at will the electron-electron interaction by an adiabatic switch-on/switch-off function. We focus on signals of the single ionization of H(2) under a strong near-infrared, four-cycle, linearly polarized laser pulse of varying intensity and within a vibrationally frozen molecular model. The observables we address are post-pulse total ionization probability profiles as a function of the laser peak intensity. Three values of the internuclear distance R taken as a parameter are considered, R = R(eq) = 1.4 a.u. for the equilibrium geometry of the molecule, R = 5.0 a.u. for an elongated molecule, and R = 10.2 a.u. for a dissociating molecule. The most striking observation is the non-monotonous behavior of the ionization probability profiles at intermediate elongation distances with an instance of enhanced ionization and one of partial ionization quenching. We give an interpretation of this in terms of a resonance-enhanced-multiphoton ionization mechanism with interfering overlapping resonances resulting from excited electronic states.
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Zdanovskaia, M. A., Martin-Drumel, M. - A., Kisiel, Z., Pirali, O., Esselman, B. J., Woods, R. C., & McMahon, R. J. (2022). The eight lowest-energy vibrational states of benzonitrile: analysis of Coriolis and Darling-Dennison couplings by millimeter-wave and far-infrared spectroscopy. Journal of Molecular Spectroscopy, 383, 111568.
Résumé: A combination of millimeter-wave and high-resolution infrared data is used to analyze the eight lowest-energy vibrational states of benzonitrile (C6H5CN, C2v, μa = 4.5 D), a benzene derivative recently detected in the interstellar medium. The overtone states v22 = 2 and v33 = 2, combination state v22 = 1, v33 = 1, and fundamental states v21 = 1 and v15 = 1 are studied for the first time by rotationally resolved spectroscopy. The three former states form a Coriolis- and Darling-Dennison-coupled triad of interacting states for which the coupling terms and highly precise, deperturbed energy separations have been measured. The use of sub-millimeter and far-infrared data together enabled the determination of the purely rotational and coupling parameters for the six lowest-energy vibrationally excited states of benzonitrile, along with their highly precise energies (E22 = 141.4810252 (57) cm−1, E33 = 160.5891953 (47) cm−1, E2×22 = 282.6295417 (83) cm−1, E22+33 = 302.5795909 (87) cm−1, E2×33 = 321.4923856 (77) cm−1, E21 = 372.257993 (10) cm−1). These energies, the resultant experimental anharmonicity constants (x22,22 = − 0.1663 cm−1, x33,33 = 0.1570 cm−1, and x22,33 = 0.4909 cm−1), and semi-experimental harmonic frequencies (ω22 = 142.9 cm−1 and ω33 = 161.0 cm−1) for the ν22 and ν33 states are compared to CCSD(T)/ANO1 predicted values. The spectroscopic and coupling constants determined in this work for the vibrational ground state, the two lowest-energy fundamental states, and the corresponding first overtone and combination states successfully predict experimental frequencies down to 8 GHz. Particularly for the vibrationally excited states, the ability to predict transition frequencies so far outside the frequency region in which the constants were determined confirms that the rotational and distortion constants, as well as the coupling terms, are determined reasonably close to their true values. The ability to accurately extrapolate also demonstrates the suitability of the determined constants as the basis for extraterrestrial identification and examination of these vibrational states of benzonitrile.
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Actes de Conférences |
Shao, F., Woo, S. Y., Wu, N., Schneider, R., Mayne, A. J., Michaelis, S., Arora, A., Carey, B. J., Preuß, J. A., Bonnet, N., Mattevi, C., Watanabe, K., Taniguchi, T., Bratschitsch, R., & Tizei, L. H. G. (2022). Disentangling Exciton Linewidth Broadening Factors in Transition Metal Dichalcogenide Monolayer with Electron Energy Loss Spectroscopy. In MICROSCOPY & MICROANALYSIS (Vol. 28, pp. 1778–1779).
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Woo, S. Y., Shao, F., Wu, N., Schneider, R., Arora, A., Preuß, J. A., Carey, B. J., de Vasconcellos, S. M., Mayne, A. J., Bratschitsch, R., & Tizei, L. H. G. (2022). Strain Relaxation and Excitonic Absorption of Atomically-Reconstructed WSe2 Moiré Superlattices. In MICROSCOPY & MICROANALYSIS (Vol. 28, pp. 2462–2463).
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